Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCAF13DDB1 and CUL4 associated factor 13. (596 aa)    
Predicted Functional Partners:
UTP3
UTP3 small subunit processome component.
   
 0.995
UTP14A
Uncharacterized protein.
   
 0.995
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.994
KRR1
KRR1 small subunit processome component homolog.
   
 0.993
UTP20
UTP20 small subunit processome component.
   
 0.992
PDCD11
Programmed cell death 11.
   
 0.991
EMG1
EMG1 N1-specific pseudouridine methyltransferase.
   
 0.990
NOC4L
Nucleolar complex associated 4 homolog.
   
 0.990
WDR75
WD repeat domain 75.
   
 0.988
NOP14
NOP14 nucleolar protein.
   
 0.988
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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