STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATPAF1ATP synthase mitochondrial F1 complex assembly factor 1. (351 aa)    
Predicted Functional Partners:
ATP5F1B
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.756
ATP5F1A
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.752
ATP5F1C
ATP synthase subunit gamma.
   
  
 0.709
CDCA8
Cell division cycle associated 8.
   
 
 0.622
MRPL19
Mitochondrial ribosomal protein L19.
   
  
 0.583
ATP5PB
Uncharacterized protein.
   
  
 0.568
ATP5MC1
ATP synthase membrane subunit c locus 1; Belongs to the ATPase C chain family.
   
  
 0.553
LOC100353151
Uncharacterized protein.
   
 
 0.541
U3KNQ1_RABIT
Uncharacterized protein.
   
 
 0.541
ENSOCUP00000041993
Uncharacterized protein.
   
 
 0.541
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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