STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LEMD1LEM domain containing 1. (202 aa)    
Predicted Functional Partners:
SRPX2
Sushi repeat containing protein X-linked 2.
      
 0.722
PIP4K2B
Phosphatidylinositol-5-phosphate 4-kinase type 2 beta.
      
 0.568
MIA
SH3 domain-containing protein.
      
 0.546
CEMIP
Cell migration inducing hyaluronidase 1.
      
 0.543
BANF2
Barrier to autointegration factor 2.
      
 0.512
BANF1
Uncharacterized protein.
      
 0.500
EMD
Emerin (Predicted).
      
 0.485
PTPN14
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily.
      
 0.424
TMPO
Thymopoietin.
      
 0.420
NPM1-2
Uncharacterized protein.
      
 0.412
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.