Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NUDT1Nudix hydrolase 1; Belongs to the Nudix hydrolase family. (156 aa)    
Predicted Functional Partners:
ACY1
M20_dimer domain-containing protein.
    
 
 0.755
NUDT18
Nudix hydrolase domain-containing protein.
      
 0.725
NUDT11
Nudix hydrolase 11.
    
 
 0.708
OGG1
OGG_N domain-containing protein.
      
 0.635
CCNF
Cyclin F; Belongs to the cyclin family.
   
 
 0.628
NUDT22
Nudix hydrolase 22.
   
  
 0.624
NUDT14
Uncharacterized protein.
   
 
 0.602
MUTYH
Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.
      
 0.547
EIF4E3
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.543
NUDT5
Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family.
   
 
 0.540
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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