STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUDT1Nudix hydrolase 1; Belongs to the Nudix hydrolase family. (156 aa)    
Predicted Functional Partners:
NUDT11
Nudix hydrolase 11.
    
 
 0.711
NUDT22
Nudix hydrolase 22.
   
  
 0.609
NUDT18
Nudix hydrolase domain-containing protein.
      
 0.595
NUDT14
Uncharacterized protein.
   
 
 0.593
CNIH4
Cornichon family AMPA receptor auxiliary protein 4.
     
 0.571
OGG1
OGG_N domain-containing protein.
      
 0.570
MUTYH
Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.
   
  
 0.547
METTL11B
Methyltransferase like 11B.
   
  
 0.530
NUDT2
Nudix hydrolase 2.
   
 
 0.514
LOC100344154-2
ATP synthase-coupling factor 6, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain; Belongs to the eukaryotic ATPase subunit F6 family.
      
 0.497
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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