STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRSF5Serine and arginine rich splicing factor 5. (276 aa)    
Predicted Functional Partners:
SRPK1
SRSF protein kinase 1.
   
 0.987
SRSF7
CCHC-type domain-containing protein.
   
 0.952
NXF1
Nuclear RNA export factor 1.
   
 0.877
SRSF11
RRM domain-containing protein.
   
 0.875
SRSF3
Serine and arginine rich splicing factor 3.
   
0.865
PABPN1
RRM domain-containing protein.
   
 0.833
RBM25
RNA binding motif protein 25.
   
 
 0.815
SRRM1
PWI domain-containing protein.
   
 0.808
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.806
LOC100339773
Uncharacterized protein.
   
 0.805
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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