STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYCP3Synaptonemal complex protein 3. (234 aa)    
Predicted Functional Partners:
MSH4
MutS homolog 4.
   
 
 0.936
BRCA2
BRCA2 DNA repair associated.
    
 0.930
HORMAD2
HORMA domain containing 2.
   
 
 0.925
SPO11
SPO11 initiator of meiotic double stranded breaks.
      
 0.925
HORMAD1
HORMA domain containing 1.
   
 
 0.921
REC8
REC8 meiotic recombination protein.
    
 0.913
SYCE3
Synaptonemal complex central element protein 3.
     
 0.905
STRA8
Stimulated by retinoic acid 8.
   
  
 0.882
STAG3
Stromal antigen 3.
    
 0.857
DDX4
DEAD-box helicase 4; Belongs to the DEAD box helicase family.
   
 
 0.832
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.