STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G1SWZ6_RABITUncharacterized protein. (227 aa)    
Predicted Functional Partners:
XPO1
Exportin 1.
   
 0.524
G1SGC2_RABIT
Histone H2A; Belongs to the histone H2A family.
   
 
 0.468
H2AFV
Histone H2A.V; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post- translational modifications of histones, also called histone code, and nucleosome remodeling. May be involved in the formation of constitutive heterochromatin. May be required for c [...]
   
 
 0.468
ENSOCUP00000035227
Histone H2A; Belongs to the histone H2A family.
   
 
 0.468
ENSOCUP00000040431
Histone H2A; Belongs to the histone H2A family.
   
 
 0.468
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
   
 0.450
PAPPA
Pappalysin 1.
   
   0.439
NUP214
Nucleoporin 214.
     
 0.431
G1ST68_RABIT
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.417
G1TKV1_RABIT
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.417
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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