Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHX5LIM homeobox 5. (402 aa)    
Predicted Functional Partners:
PAX2
Paired box 2.
   
 0.831
EMX2
Empty spiracles homeobox 2.
    
 0.818
LDB1
LIM domain binding 1.
    
 0.788
SSBP3
Single stranded DNA binding protein 3.
    
 
 0.772
PAX8
Paired box 8.
   
 0.717
CCNK
Cyclin K; Belongs to the cyclin family.
    
   0.711
FEZF1
FEZ family zinc finger 1.
    
 0.702
LDB2
LIM domain binding 2.
    
 0.698
EMX1
Empty spiracles homeobox 1.
    
 0.658
TLX3
T cell leukemia homeobox 3.
  
 
 0.657
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.