STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSIP1PC4 and SFRS1 interacting protein 1. (531 aa)    
Predicted Functional Partners:
POGZ
Pogo transposable element derived with ZNF domain.
   
 
 0.859
KMT2B
Lysine methyltransferase 2B.
    
 
 0.852
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 
 0.784
DPY30
Uncharacterized protein.
   
  
 0.714
ASH2L
B30.2/SPRY domain-containing protein.
    
 
 0.698
SMC3
Structural maintenance of chromosomes protein.
   
 
 0.679
DNAJB13
DnaJ heat shock protein family (Hsp40) member B13.
    
 
 0.664
DNAJB4
DnaJ heat shock protein family (Hsp40) member B4.
    
 
 0.664
DNAJB5
DnaJ heat shock protein family (Hsp40) member B5.
    
 
 0.664
H3C13
Histone H3; Belongs to the histone H3 family.
   
 
 0.657
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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