STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM167AProtein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family. (72 aa)    
Predicted Functional Partners:
FAM162B
Family with sequence similarity 162 member B.
      
 0.862
USP32
Uncharacterized protein; Belongs to the peptidase C19 family.
      
 0.766
SCFD1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
   
  
 0.748
YPEL5
Protein yippee-like; Belongs to the yippee family.
   
  
 0.742
TMEM9
Transmembrane protein 9.
   
  
 0.735
WDR7
WD repeat domain 7.
      
 0.734
GPR162
G protein-coupled receptor 162.
      
 0.731
GOSR1
Golgi SNAP receptor complex member 1.
   
  
 0.711
TENT5A
Terminal nucleotidyltransferase 5A.
      
 0.686
GOLGA5
Golgin A5.
   
  
 0.678
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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