STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM223Transmembrane protein 223. (199 aa)    
Predicted Functional Partners:
SMIM4
Small integral membrane protein 4.
   
  
 0.798
NT5DC2
5'-nucleotidase domain containing 2.
      
 0.667
UQCC1
Ubiquinol-cytochrome c reductase complex assembly factor 1.
      
 0.650
COMMD10
COMM domain-containing protein.
      
 0.649
NAA20
N(alpha)-acetyltransferase 20, NatB catalytic subunit.
   
  
 0.616
NAA15
N(alpha)-acetyltransferase 15, NatA auxiliary subunit.
      
 0.612
OXA1L
OXA1L mitochondrial inner membrane protein.
      
 0.581
ATP5J2
Uncharacterized protein.
   
  
 0.557
NAA10
N(alpha)-acetyltransferase 10, NatA catalytic subunit.
   
  
 0.551
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
   
  
 0.540
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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