STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPDC2Popeye domain containing 2. (364 aa)    
Predicted Functional Partners:
XIRP1
Xin actin binding repeat containing 1.
   
  
 0.725
TMEM201
Transmembrane protein 201.
   
  
 0.700
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
      
 0.697
ANO5
Anoctamin.
    
 
 0.641
TMEM209
Transmembrane protein 209.
      
 0.612
DHRS7
Dehydrogenase/reductase 7; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.594
HCN4
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4; Hyperpolarization-activated ion channel with very slow activation and inactivation exhibiting weak selectivity for potassium over sodium ions. May contribute to the native pacemaker currents in heart (If) that regulate the rhythm of heart beat. May contribute to the native pacemaker currents in neurons (Ih). May mediate responses to sour stimuli.
   
  
 0.548
PLPP7
Phospholipid phosphatase 7 (inactive).
   
  
 0.547
TMEM38A
Trimeric intracellular cation channel type A; Monovalent cation channel required for maintenance of rapid intracellular calcium release. May act as a potassium counter-ion channel that functions in synchronization with calcium release from intracellular stores; Belongs to the TMEM38 family.
   
  
 0.531
TMEM126A
Uncharacterized protein.
      
 0.525
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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