STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTBP1Latent transforming growth factor beta binding protein 1. (1705 aa)    
Predicted Functional Partners:
TGFB2
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.990
TGFB3
Transforming growth factor beta 3.
   
 0.986
LOC103345451
TGFb_propeptide domain-containing protein.
   
 0.982
ENSOCUP00000037329
TGFb_propeptide domain-containing protein.
   
 0.982
ENSOCUP00000044284
TGFb_propeptide domain-containing protein.
   
 0.982
THBS1
Thrombospondin 1.
   
 
 0.954
G1TC56_RABIT
TGFb_propeptide domain-containing protein.
    
 0.950
FBN1
Fibrillin 1.
   
 
0.875
FN1
Fibronectin; Fibronectins bind cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin. Fibronectins are involved in cell adhesion, cell motility, opsonization, wound healing, and maintenance of cell shape. Involved in osteoblast compaction through the fibronectin fibrillogenesis cell-mediated matrix assembly process, essential for osteoblast mineralization. Participates in the regulation of type I collagen deposition by osteoblasts (By similarity).
   
 0.820
LTBP2
Latent transforming growth factor beta binding protein 2.
     
0.689
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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