Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRGAP1SLIT-ROBO Rho GTPase activating protein 1. (1085 aa)    
Predicted Functional Partners:
ROBO1
Roundabout guidance receptor 1.
   
 0.961
SRGAP2
Uncharacterized protein.
   
 0.931
ROBO2
Roundabout guidance receptor 2.
   
 0.923
CDC42
Uncharacterized protein.
   
 0.905
CDC42-2
Uncharacterized protein.
   
 0.903
G1U2H9_RABIT
F-BAR domain-containing protein.
   
  0.821
ITSN2
Intersectin 2.
   
 0.700
GAS7
Growth arrest specific 7.
   
 0.651
FLRT2
Fibronectin leucine rich transmembrane protein 2.
     
 0.595
STK38L
Non-specific serine/threonine protein kinase.
      
 0.591
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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