STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SATB2DNA-binding protein SATB. (733 aa)    
Predicted Functional Partners:
CUX1
Cut like homeobox 1.
    
 
 0.862
FEZF2
FEZ family zinc finger 2.
    
 
 0.816
PAX6
Uncharacterized protein.
      
 0.801
CUX2
Homeobox protein cut-like.
    
 
 0.771
EMX1
Empty spiracles homeobox 1.
   
  
 0.761
FOXP2
Fork-head domain-containing protein.
    
 
 0.738
SOX5
SRY-box transcription factor 5.
      
 0.713
GFAP
Glial fibrillary acidic protein; Belongs to the intermediate filament family.
    
 
 0.684
NES
Nestin; Belongs to the intermediate filament family.
      
 0.679
TLE4
TLE family member 4, transcriptional corepressor.
      
 0.650
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.