STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC6Leucine rich repeat containing 6. (471 aa)    
Predicted Functional Partners:
ZMYND10
Uncharacterized protein.
    
 0.940
DNAI1
Dynein axonemal intermediate chain 1.
  
 
 0.874
PIH1D3
PIH1_CS domain-containing protein.
   
  
 0.871
DNAAF4
Dynein axonemal assembly factor 4.
   
 
 0.871
CCDC103
Coiled-coil domain containing 103.
    
 
 0.868
SPAG1
Sperm associated antigen 1.
   
 
 0.867
DNAI2
Dynein axonemal intermediate chain 2.
   
 
 0.861
CCDC39
Coiled-coil domain containing 39.
   
 0.861
DNAAF1
Dynein assembly factor 1, axonemal.
    
 0.850
DNAH5
Dynein axonemal heavy chain 5.
   
 
 0.827
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.