STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM155AFamily with sequence similarity 155 member A. (296 aa)    
Predicted Functional Partners:
UNC79
Uncharacterized protein.
    
 
 0.999
UNC80
Unc-80 homolog, NALCN channel complex subunit.
   
 
 0.914
NALCN
Sodium leak channel, non-selective.
   
 
 0.910
ENSOCUP00000030127
Uncharacterized protein.
 
      0.900
ABRACL
ABRA C-terminal like.
   
  
 0.724
COLEC12
Collectin subfamily member 12.
      
 0.649
MAPRE2
Microtubule associated protein RP/EB family member 2.
      
 0.648
RASSF2
Ras association domain family member 2.
      
 0.546
ITM2A
Integral membrane protein 2A.
      
 0.528
JPH1
Junctophilin-1; Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels. JPH1 contributes to the construction of the skeletal muscle triad by linking the t-tubule (transverse-tubule) and SR (sarcoplasmic reticulum) membranes (By similarity).
   
  
 0.495
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.