STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF248Zinc finger protein 248. (579 aa)    
Predicted Functional Partners:
SLC25A1
Solute carrier family 25 member 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.732
EXD1
Exonuclease 3'-5' domain containing 1.
      
 0.678
TRIM4
Tripartite motif containing 4.
   
 0.656
GTF3C1
General transcription factor IIIC subunit 1.
    
 0.649
PLEKHA8
Pleckstrin homology domain containing A8.
      
 0.613
ZNF462
Zinc finger protein 462.
      
 0.600
EXOC2
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
   
 
 0.595
GDE1
Glycerophosphodiester phosphodiesterase 1.
      
 0.582
GPCPD1
Glycerophosphocholine phosphodiesterase 1.
      
 0.556
STXBP5
Syntaxin binding protein 5.
   
  
 0.533
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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