Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL40Mitochondrial ribosomal protein L40. (188 aa)    
Predicted Functional Partners:
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.990
MRPL55
Mitochondrial ribosomal protein L55.
   
 
 0.967
MRPL50
Mitochondrial ribosomal protein L50.
   
 
 0.954
MRPS10
Mitochondrial ribosomal protein S10.
   
 
 0.944
MRPL36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.944
MRPL45
Mitochondrial ribosomal protein L45.
   
 
 0.943
MRPL49
Uncharacterized protein.
   
 
 0.938
LOC100340423
Ribosomal_S10 domain-containing protein.
   
 
 0.936
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.934
NDUFAB1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.934
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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