STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI2ERI1 exoribonuclease family member 2. (689 aa)    
Predicted Functional Partners:
TBC1D8B
TBC1 domain family member 8B.
   
  
 0.744
SNRPG
Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing.
      
 0.696
DDHD1
DDHD domain-containing protein.
   
  
 0.696
C1orf94
Chromosome 1 open reading frame 94.
   
  
 0.648
ACBD3
Acyl-CoA binding domain containing 3.
      
 0.597
ZBTB8OS
Zinc finger and BTB domain containing 8 opposite strand.
   
  
 0.582
DICER1
Uncharacterized protein.
   
 
 0.579
PTP4A1
Protein tyrosine phosphatase 4A1.
      
 0.568
R3HCC1
R3H domain-containing protein.
      
 0.568
SHOC2
SHOC2 leucine rich repeat scaffold protein.
      
 0.567
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.