STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF40Rho guanine nucleotide exchange factor 40. (1563 aa)    
Predicted Functional Partners:
ARHGEF37
Rho guanine nucleotide exchange factor 37.
     
 0.725
ARHGAP42
Rho GTPase activating protein 42.
      
 0.699
ARHGAP44
Rho GTPase activating protein 44.
      
 0.698
SLITRK4
SLIT and NTRK like family member 4.
      
 0.697
ARHGEF5
Rho guanine nucleotide exchange factor 5.
     
 0.676
FGD4
FYVE, RhoGEF and PH domain containing 4.
     
 0.622
ARHGAP9
Rho GTPase activating protein 9.
      
 0.599
KRT18
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 
 0.556
KRT8
Keratin 8; Belongs to the intermediate filament family.
    
 
 0.545
ENSOCUP00000045673
SAM domain-containing protein.
    
 
 0.526
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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