STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCARA3Scavenger receptor class A member 3. (716 aa)    
Predicted Functional Partners:
CPSF3
Cleavage and polyadenylation specific factor 3.
    
 
 0.843
SCARA5
Scavenger receptor class A member 5; Ferritin receptor that mediates non-transferrin-dependent delivery of iron. Mediates cellular uptake of ferritin-bound iron by stimulating ferritin endocytosis from the cell surface with consequent iron delivery within the cell. Delivery of iron to cells by ferritin is required for the development of specific cell types, suggesting the existence of cell type-specific mechanisms of iron traffic in organogenesis, which alternatively utilize transferrin or non- transferrin iron delivery pathways. Ferritin mediates iron uptake in capsule cells of the de [...]
    
 0.714
HGSNAT
Heparan-alpha-glucosaminide N-acetyltransferase.
   
  
 0.695
FREM1
FRAS1 related extracellular matrix 1.
      
 0.649
BPIFB2
BPI fold containing family B member 2.
      
 0.648
TMEM98
Transmembrane protein 98.
      
 0.622
MFRP
Membrane frizzled-related protein.
    
 0.622
YLPM1
YLP motif containing 1.
      
 0.570
ZC4H2
Zinc finger C4H2-type containing.
      
 0.567
TMEM218
Transmembrane protein 218.
      
 0.566
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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