Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GCSAMGerminal center associated signaling and motility. (180 aa)    
Predicted Functional Partners:
FGD6
FYVE, RhoGEF and PH domain containing 6.
      
 0.524
BOD1L1
Biorientation of chromosomes in cell division 1 like 1.
      
 0.522
GGT5
Gamma-glutamyltransferase 5.
      
 0.489
UPK3A
Uroplakin 3A.
      
 0.486
SUSD4
Sushi domain containing 4.
      
 0.485
LPAR2
Lysophosphatidic acid receptor 2; Belongs to the G-protein coupled receptor 1 family.
      
 0.473
PPM1B
PPM-type phosphatase domain-containing protein.
      
 0.462
PPM1N
Protein phosphatase, Mg2+/Mn2+ dependent 1N (putative).
      
 0.462
PACSIN1
Protein kinase C and casein kinase substrate in neurons 1.
      
 0.461
CDC123
Cell division cycle protein 123 homolog; Required for S phase entry of the cell cycle. Belongs to the CDC123 family.
      
 0.444
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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