STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYPNMyopalladin. (1381 aa)    
Predicted Functional Partners:
NEB
Nebulin.
   
 0.951
NEBL
Nebulette.
   
 0.895
ANKRD1
Ankyrin repeat domain-containing protein 1; May play an important role in endothelial cell activation. May act as a nuclear transcription factor that negatively regulates the expression of cardiac genes (By similarity).
   
 0.839
TCAP
Titin-cap.
   
 0.834
ACTN2
Actinin alpha 2.
   
 0.826
MRTFB
Myocardin related transcription factor B.
      
 0.742
MYOZ2
Myozenin 2.
   
  
 0.736
LMOD3
Leiomodin 3.
   
 
 0.725
KLHL40
Kelch like family member 40.
   
 
 0.717
KLHL41
Kelch like family member 41.
   
 
 0.716
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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