STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHST4Sulfotransferase; Belongs to the sulfotransferase 1 family. (389 aa)    
Predicted Functional Partners:
CHST2
Sulfotransferase; Belongs to the sulfotransferase 1 family.
     
0.916
ST3GAL6
ST3 beta-galactoside alpha-2,3-sialyltransferase 6; Belongs to the glycosyltransferase 29 family.
   
  
 0.729
KERA
Keratocan.
   
 
 0.701
LUM
Lumican.
     
 0.649
SELL
L-selectin; Calcium-dependent lectin that mediates cell adhesion by binding to glycoproteins on neighboring cells. Mediates the adherence of lymphocytes to endothelial cells of high endothelial venules in peripheral lymph nodes. Promotes initial tethering and rolling of leukocytes in endothelia.
     
 0.616
NTAN1
N-terminal asparagine amidase.
      
 0.595
ST3GAL4
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
   
  
 0.544
CHST13
Carbohydrate sulfotransferase.
   
  
 0.511
LOC100350827
Rieske domain-containing protein.
   
  
 0.496
ADGRF1
Adhesion G protein-coupled receptor F1; Belongs to the G-protein coupled receptor 2 family.
      
 0.492
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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