STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM189BFamily with sequence similarity 189 member B. (677 aa)    
Predicted Functional Partners:
SYNRG
Synergin gamma.
   
 0.782
JAGN1
Jagunal homolog 1.
   
  
 0.676
NDFIP2
Nedd4 family interacting protein 2.
   
  
 0.650
N4BP1
NEDD4 binding protein 1.
      
 0.645
NDFIP1
Nedd4 family interacting protein 1.
   
  
 0.598
BCAP31
B cell receptor associated protein 31.
   
 
 0.582
ST3GAL3
ST3 beta-galactoside alpha-2,3-sialyltransferase 3; Belongs to the glycosyltransferase 29 family.
   
  
 0.575
SCAMP1
Secretory carrier-associated membrane protein.
   
 0.562
PLD2
Phospholipase D2.
   
 
 0.547
RAB3IL1
RAB3A interacting protein like 1.
    
 0.542
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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