SPATA13 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

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Experiments

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Textmining

[Homology]

Score

SPATA13

Uncharacterized protein. (1334 aa)

Predicted Functional Partners:

APC

0.955

RAC1

0.949

CDC42-2

0.683

CDC42

0.683

GABRA2

0.577

YWHAE

0.528

ITSN1

0.517

ITSN2

0.516

ENSOCUP00000027633

0.512

RAC2

0.512

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APC	SPATA13	ENSOCUP00000013423	ENSOCUP00000008690	APC regulator of WNT signaling pathway.	Uncharacterized protein.	0.955
CDC42	ENSOCUP00000027633	ENSOCUP00000047724	ENSOCUP00000027633	Uncharacterized protein.	Uncharacterized protein.	0.564
CDC42	ITSN1	ENSOCUP00000047724	ENSOCUP00000047769	Uncharacterized protein.	Intersectin 1.	0.979
CDC42	ITSN2	ENSOCUP00000047724	ENSOCUP00000019448	Uncharacterized protein.	Intersectin 2.	0.997
CDC42	RAC1	ENSOCUP00000047724	ENSOCUP00000008574	Uncharacterized protein.	Rac family small GTPase 1.	0.589
CDC42	RAC2	ENSOCUP00000047724	ENSOCUP00000033582	Uncharacterized protein.	Rac family small GTPase 2.	0.617
CDC42	SPATA13	ENSOCUP00000047724	ENSOCUP00000008690	Uncharacterized protein.	Uncharacterized protein.	0.683
CDC42-2	ENSOCUP00000027633	ENSOCUP00000025997	ENSOCUP00000027633	Uncharacterized protein.	Uncharacterized protein.	0.564
CDC42-2	ITSN1	ENSOCUP00000025997	ENSOCUP00000047769	Uncharacterized protein.	Intersectin 1.	0.981
CDC42-2	ITSN2	ENSOCUP00000025997	ENSOCUP00000019448	Uncharacterized protein.	Intersectin 2.	0.997
CDC42-2	RAC1	ENSOCUP00000025997	ENSOCUP00000008574	Uncharacterized protein.	Rac family small GTPase 1.	0.957
CDC42-2	RAC2	ENSOCUP00000025997	ENSOCUP00000033582	Uncharacterized protein.	Rac family small GTPase 2.	0.638
CDC42-2	SPATA13	ENSOCUP00000025997	ENSOCUP00000008690	Uncharacterized protein.	Uncharacterized protein.	0.683
ENSOCUP00000027633	CDC42	ENSOCUP00000027633	ENSOCUP00000047724	Uncharacterized protein.	Uncharacterized protein.	0.564
ENSOCUP00000027633	CDC42-2	ENSOCUP00000027633	ENSOCUP00000025997	Uncharacterized protein.	Uncharacterized protein.	0.564
ENSOCUP00000027633	ITSN1	ENSOCUP00000027633	ENSOCUP00000047769	Uncharacterized protein.	Intersectin 1.	0.919
ENSOCUP00000027633	ITSN2	ENSOCUP00000027633	ENSOCUP00000019448	Uncharacterized protein.	Intersectin 2.	0.990
ENSOCUP00000027633	SPATA13	ENSOCUP00000027633	ENSOCUP00000008690	Uncharacterized protein.	Uncharacterized protein.	0.512
GABRA2	SPATA13	ENSOCUP00000031160	ENSOCUP00000008690	Gamma-aminobutyric acid type A receptor alpha2 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein.	0.577
ITSN1	CDC42	ENSOCUP00000047769	ENSOCUP00000047724	Intersectin 1.	Uncharacterized protein.	0.979