STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARNPSAP domain containing ribonucleoprotein. (210 aa)    
Predicted Functional Partners:
DDX39B
DExD-box helicase 39B.
   
 0.994
POLDIP3
DNA polymerase delta interacting protein 3.
   
 0.993
G1U968_RABIT
Uncharacterized protein.
   
 0.964
CHTOP
FoP_duplication domain-containing protein.
   
 0.945
THOC1
THO complex 1.
   
 0.941
THOC3
THO complex 3.
   
 
 0.934
ZC3H11A
Uncharacterized protein.
    
 0.931
THOC7
THO complex 7.
   
 0.868
THOC5
THO complex 5.
   
 0.862
THOC2
THO complex 2.
   
 0.846
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.