STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MKRN1Makorin ring finger protein 1. (479 aa)    
Predicted Functional Partners:
ECD
Ecdysoneless cell cycle regulator.
      
 0.747
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.743
FAM131B
Family with sequence similarity 131 member B.
      
 0.722
CLCN6
Chloride transport protein 6; Chloride transport protein, initially identified as voltage- gated chloride channel. The presence of the conserved gating glutamate residues suggests that is functions as antiporter (By similarity). Belongs to the chloride channel (TC 2.A.49) family. ClC- 6/CLCN6 subfamily.
      
 0.666
UBOX5
U-box domain containing 5.
     
 0.623
RBM18
RNA binding motif protein 18.
   
 
 0.622
PABPC1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 
 0.585
FAM32A
Family with sequence similarity 32 member A.
      
 0.541
CFAP97
Cilia and flagella associated protein 97.
   
  
 0.529
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
    0.529
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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