STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100340374Uncharacterized protein. (685 aa)    
Predicted Functional Partners:
G1SV48_RABIT
Uncharacterized protein.
      
 0.638
CCDC136
Coiled-coil domain containing 136.
  
  
 0.615
TYROBP
TYRO protein tyrosine kinase binding protein.
   
 0.588
CD22
CD22 molecule.
   
 
0.567
AOC3
Amine oxidase; Belongs to the copper/topaquinone oxidase family.
      
 0.552
HMGB1
High-mobility group box 1 (Predicted).
   
  
 0.551
ENSOCUP00000023657
annotation not available
   
  
 0.534
ENSOCUP00000033999
annotation not available
   
  
 0.534
CBL
Cbl proto-oncogene.
   
 
 0.520
G1T749_RABIT
IGv domain-containing protein.
  
 0.512
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.