STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM106BTransmembrane protein 106B. (275 aa)    
Predicted Functional Partners:
GRN
Granulin precursor.
   
  
 0.844
CHMP2B
Charged multivesicular body protein 2B.
   
 
 0.782
C9orf72
C9orf72-SMCR8 complex subunit.
      
 0.770
SORT1
Sortilin.
   
  
 0.618
MAPT
Microtubule-associated protein.
    
 
 0.601
PPT1
Palmitoyl-protein thioesterase 1.
      
 0.585
LAMP1
Lysosomal associated membrane protein 1.
    
 
 0.578
ATP6V1A
ATPase H+ transporting V1 subunit A.
   
  
 0.575
PSAP
Prosaposin.
   
  
 0.560
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
     
 0.538
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.