STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC21Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (265 aa)    
Predicted Functional Partners:
ZDHHC20
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 
 0.793
CCDC171
Coiled-coil domain containing 171.
    
 0.778
ZDHHC4
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.696
ZDHHC24
Uncharacterized protein.
      
 0.679
FREM1
FRAS1 related extracellular matrix 1.
   
  
 0.649
HEATR5B
HEAT repeat containing 5B.
      
 0.648
NOS3
Nitric oxide synthase; Produces nitric oxide (NO).
   
 0.623
ACAD9
Acyl-CoA dehydrogenase family member 9.
   
    0.599
MPDZ
Multiple PDZ domain crumbs cell polarity complex component.
      
 0.593
SPCS3
Signal peptidase complex subunit 3.
   
  
 0.552
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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