Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SSBLupus La protein homolog; Binds to the 3' poly(U) terminus of nascent RNA polymerase III transcripts, protecting them from exonuclease digestion and facilitating their folding and maturation. (405 aa)    
Predicted Functional Partners:
RO60
Ro60, Y RNA binding protein.
   
 
 0.899
LARP7
La ribonucleoprotein domain family member 7.
   
 
0.851
SPINDOC
Spindlin interactor and repressor of chromatin binding.
      
 0.849
METAP2
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily.
   
    0.834
NCL
Nucleolin.
   
 
 0.802
SRSF3
Serine and arginine rich splicing factor 3.
   
  
 0.765
NOP58
NOP58 ribonucleoprotein.
   
 
 0.763
DNAJC2
DnaJ heat shock protein family (Hsp40) member C2.
   
    0.740
ILF2
Interleukin enhancer binding factor 2.
   
  
 0.726
ZC3H15
Zinc finger CCCH-type containing 15.
   
    0.716
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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