Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
RAB3GAP2RAB3 GTPase activating non-catalytic protein subunit 2. (1429 aa)    
Predicted Functional Partners:
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
   
 0.999
RAB18
Uncharacterized protein.
     
 0.896
TBC1D20
TBC1 domain family member 20.
   
  
 0.877
VAPB
VAMP associated protein B and C.
   
 
 0.794
TMCO4
Transmembrane and coiled-coil domains 4.
      
 0.770
C2CD2
C2 calcium dependent domain containing 2.
      
 0.707
REEP4
Uncharacterized protein.
      
 0.691
RAB6A
RAB6A, member RAS oncogene family.
     
 0.681
G1U8W6_RABIT
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
     
 0.680
U3KN82_RABIT
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
     
 0.680
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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