STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC19Tetratricopeptide repeat domain 19. (309 aa)    
Predicted Functional Partners:
LYRM7
LYR motif containing 7; Belongs to the complex I LYR family.
      
 0.851
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.836
BCS1L
BCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone; Belongs to the AAA ATPase family.
   
 
 0.804
UQCC1
Ubiquinol-cytochrome c reductase complex assembly factor 1.
   
  
 0.802
ZSWIM7
Zinc finger SWIM-type containing 7.
      
 0.734
UQCC3
Ubiquinol-cytochrome c reductase complex assembly factor 3.
   
  
 0.684
KIF13A
Kinesin family member 13A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.656
ENSOCUP00000041368
Uncharacterized protein.
      
 0.621
TIMM22
Translocase of inner mitochondrial membrane 22.
   
  
 0.605
LOC100355689
NACHT domain-containing protein.
   
 0.598
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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