STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC30A5Solute carrier family 30 member 5. (767 aa)    
Predicted Functional Partners:
SLC30A6
Solute carrier family 30 member 6.
  
 
0.893
ATRN
Attractin.
   
  
 0.684
SLC30A9
Solute carrier family 30 member 9.
  
 
 0.682
TTR
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain (By similarity). Belongs to the transthyretin family.
   
  
 0.680
TMEM19
Transmembrane protein 19.
   
  
 0.671
SCARF1
Scavenger receptor class F member 1.
   
  
 0.665
SLC39A7
Solute carrier family 39 member 7.
  
 0.655
INO80D
INO80 complex subunit D.
      
 0.650
NTN5
Netrin 5.
      
 0.637
COL3A1
Collagen type III alpha 1 chain.
   
 
 0.636
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.