STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM120AFamily with sequence similarity 120A. (1028 aa)    
Predicted Functional Partners:
PABPC4
Poly(A) binding protein cytoplasmic 4.
   
 
 0.666
SUCO
SUN domain containing ossification factor.
   
  
 0.652
ZMYM5
Uncharacterized protein.
      
 0.590
MPP7
Membrane palmitoylated protein 7; Belongs to the MAGUK family.
   
  
 0.572
IL13RA2
Interleukin 13 receptor subunit alpha 2.
      
 0.562
ABRAXAS2
Abraxas 2, BRISC complex subunit.
   
  
 0.546
ZC3HAV1
Poly [ADP-ribose] polymerase.
   
 
 0.530
LIMD2
LIM domain containing 2.
      
 0.528
C6orf47
Chromosome 6 open reading frame 47.
      
 0.528
KRI1
KRI1 homolog.
   
  
 0.521
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.