STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPAG4SUN domain-containing protein. (443 aa)    
Predicted Functional Partners:
ODF1
Outer dense fiber of sperm tails 1.
   
 
 0.878
SYNE2
KASH domain-containing protein.
    
 0.865
SYNE1
Spectrin repeat containing nuclear envelope protein 1.
    
 0.819
G1U3T8_RABIT
MRP domain-containing protein.
 
      0.810
SFI1
SFI1 centrin binding protein.
      
 0.587
SPATA6
Spermatogenesis associated 6.
      
 0.582
LMNB1
Lamin B1; Belongs to the intermediate filament family.
    
 0.524
LMNA
Lamin A/C; Belongs to the intermediate filament family.
    
 0.521
SPAG5
Sperm associated antigen 5.
    
 
 0.514
FBXO47
F-box protein 47.
   
  
 0.509
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.