Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPAG4SUN domain-containing protein. (443 aa)    
Predicted Functional Partners:
G1U3T8_RABIT
MRP domain-containing protein.
 
   
  0.908
SYNE1
Spectrin repeat containing nuclear envelope protein 1.
    
 0.797
ODF1
Outer dense fiber of sperm tails 1.
   
 
 0.764
SYNE2
KASH domain-containing protein.
    
 0.761
SUN3
Sad1 and UNC84 domain containing 3.
  
0.759
SUN2
Sad1 and UNC84 domain containing 2.
  
 
0.745
CCDC155
Uncharacterized protein.
    
 0.721
SUN5
Sad1 and UNC84 domain containing 5.
  
0.695
SYNE3
Spectrin repeat containing nuclear envelope family member 3.
    
 0.669
ZNF316
Zinc finger protein 316.
    
 
 0.657
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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