CD209 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CD209

C-type lectin domain-containing protein. (239 aa)

Predicted Functional Partners:

KSR1

0.912

RHOA

0.907

ARHGEF12

0.905

LOC100356250

0.904

LOC100346856

0.904

LOC100348967

0.904

PLK3

0.900

ICAM3

0.895

ICAM2

0.813

CD163

0.807

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARHGEF12	CD209	ENSOCUP00000042152	ENSOCUP00000009370	Rho guanine nucleotide exchange factor 12.	C-type lectin domain-containing protein.	0.905
ARHGEF12	LOC100346856	ENSOCUP00000042152	ENSOCUP00000016110	Rho guanine nucleotide exchange factor 12.	Uncharacterized protein.	0.956
ARHGEF12	LOC100348967	ENSOCUP00000042152	ENSOCUP00000020472	Rho guanine nucleotide exchange factor 12.	Uncharacterized protein.	0.956
ARHGEF12	LOC100356250	ENSOCUP00000042152	ENSOCUP00000015699	Rho guanine nucleotide exchange factor 12.	Uncharacterized protein.	0.956
ARHGEF12	RHOA	ENSOCUP00000042152	ENSOCUP00000011466	Rho guanine nucleotide exchange factor 12.	Ras homolog family member A.	0.994
CD163	CD209	ENSOCUP00000041329	ENSOCUP00000009370	CD163 molecule.	C-type lectin domain-containing protein.	0.807
CD209	ARHGEF12	ENSOCUP00000009370	ENSOCUP00000042152	C-type lectin domain-containing protein.	Rho guanine nucleotide exchange factor 12.	0.905
CD209	CD163	ENSOCUP00000009370	ENSOCUP00000041329	C-type lectin domain-containing protein.	CD163 molecule.	0.807
CD209	ICAM2	ENSOCUP00000009370	ENSOCUP00000011071	C-type lectin domain-containing protein.	Intercellular adhesion molecule 2.	0.813
CD209	ICAM3	ENSOCUP00000009370	ENSOCUP00000017069	C-type lectin domain-containing protein.	Intercellular adhesion molecule 3.	0.895
CD209	KSR1	ENSOCUP00000009370	ENSOCUP00000006098	C-type lectin domain-containing protein.	Kinase suppressor of ras 1.	0.912
CD209	LOC100346856	ENSOCUP00000009370	ENSOCUP00000016110	C-type lectin domain-containing protein.	Uncharacterized protein.	0.904
CD209	LOC100348967	ENSOCUP00000009370	ENSOCUP00000020472	C-type lectin domain-containing protein.	Uncharacterized protein.	0.904
CD209	LOC100356250	ENSOCUP00000009370	ENSOCUP00000015699	C-type lectin domain-containing protein.	Uncharacterized protein.	0.904
CD209	PLK3	ENSOCUP00000009370	ENSOCUP00000024465	C-type lectin domain-containing protein.	Serine/threonine-protein kinase PLK.	0.900
CD209	RHOA	ENSOCUP00000009370	ENSOCUP00000011466	C-type lectin domain-containing protein.	Ras homolog family member A.	0.907
ICAM2	CD209	ENSOCUP00000011071	ENSOCUP00000009370	Intercellular adhesion molecule 2.	C-type lectin domain-containing protein.	0.813
ICAM2	ICAM3	ENSOCUP00000011071	ENSOCUP00000017069	Intercellular adhesion molecule 2.	Intercellular adhesion molecule 3.	0.931
ICAM3	CD209	ENSOCUP00000017069	ENSOCUP00000009370	Intercellular adhesion molecule 3.	C-type lectin domain-containing protein.	0.895
ICAM3	ICAM2	ENSOCUP00000017069	ENSOCUP00000011071	Intercellular adhesion molecule 3.	Intercellular adhesion molecule 2.	0.931