STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THUMPD3THUMP domain containing 3. (506 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
   
 0.871
SETD5
SET domain containing 5.
   
  
 0.799
ITSN1
Intersectin 1.
   
 0.735
LHFPL4
LHFPL tetraspan subfamily member 4.
      
 0.701
METTL5
Methyltransferase like 5.
   
 
 0.642
WASL
WASP like actin nucleation promoting factor.
   
 0.608
WAS
WASP actin nucleation promoting factor.
   
 0.608
BUD23
BUD23 rRNA methyltransferase and ribosome maturation factor.
      
 0.599
GAS7
Growth arrest specific 7.
   
 0.594
PUS10
Pseudouridine synthase 10.
   
  
 0.593
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.