STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL42Mitochondrial ribosomal protein L42. (142 aa)    
Predicted Functional Partners:
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
 
 0.901
MRPS22
Mitochondrial ribosomal protein S22.
   
 0.874
MRPS18A
Mitochondrial ribosomal protein S18A.
   
 0.858
MRPL13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
   0.806
MRPL41
Mitochondrial ribosomal protein L41.
   
 
 0.790
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.776
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.771
MRPS12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
   
 0.760
MRPL1
Mitochondrial ribosomal protein L1.
   
 
 0.760
MRPL22
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
   0.756
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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