MYBPH protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MYBPH

Myosin binding protein H. (506 aa)

Predicted Functional Partners:

SLAMF1

0.787

FAM178B

0.761

G1U9S3_RABIT

0.686

ACOXL

0.648

NECTIN4

0.638

OCA2

0.636

GLDC

0.635

LOC100341359

0.635

AMT

0.629

METTL7B

0.599

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACOXL	MYBPH	ENSOCUP00000026476	ENSOCUP00000009479	Acyl-CoA oxidase like.	Myosin binding protein H.	0.648
AMT	GLDC	ENSOCUP00000047502	ENSOCUP00000003560	Aminomethyltransferase.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.999
AMT	MYBPH	ENSOCUP00000047502	ENSOCUP00000009479	Aminomethyltransferase.	Myosin binding protein H.	0.629
AMT	OCA2	ENSOCUP00000047502	ENSOCUP00000003051	Aminomethyltransferase.	OCA2 melanosomal transmembrane protein.	0.829
FAM178B	METTL7B	ENSOCUP00000045252	ENSOCUP00000024252	Uncharacterized protein.	Methyltransferase like 7B.	0.696
FAM178B	MYBPH	ENSOCUP00000045252	ENSOCUP00000009479	Uncharacterized protein.	Myosin binding protein H.	0.761
G1U9S3_RABIT	MYBPH	ENSOCUP00000014521	ENSOCUP00000009479	Uncharacterized protein.	Myosin binding protein H.	0.686
GLDC	AMT	ENSOCUP00000003560	ENSOCUP00000047502	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Aminomethyltransferase.	0.999
GLDC	MYBPH	ENSOCUP00000003560	ENSOCUP00000009479	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Myosin binding protein H.	0.635
GLDC	OCA2	ENSOCUP00000003560	ENSOCUP00000003051	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	OCA2 melanosomal transmembrane protein.	0.634
LOC100341359	MYBPH	ENSOCUP00000010460	ENSOCUP00000009479	Membrane cofactor protein; Acts as a cofactor for complement factor I, a serine protease which protects autologous cells against complement-mediated injury by cleaving C3b and C4b deposited on host tissue. May be involved in the fusion of the spermatozoa with the oocyte during fertilization.	Myosin binding protein H.	0.635
LOC100341359	NECTIN4	ENSOCUP00000010460	ENSOCUP00000002045	Membrane cofactor protein; Acts as a cofactor for complement factor I, a serine protease which protects autologous cells against complement-mediated injury by cleaving C3b and C4b deposited on host tissue. May be involved in the fusion of the spermatozoa with the oocyte during fertilization.	Nectin cell adhesion molecule 4.	0.571
LOC100341359	SLAMF1	ENSOCUP00000010460	ENSOCUP00000024097	Membrane cofactor protein; Acts as a cofactor for complement factor I, a serine protease which protects autologous cells against complement-mediated injury by cleaving C3b and C4b deposited on host tissue. May be involved in the fusion of the spermatozoa with the oocyte during fertilization.	Signaling lymphocytic activation molecule family member 1.	0.668
METTL7B	FAM178B	ENSOCUP00000024252	ENSOCUP00000045252	Methyltransferase like 7B.	Uncharacterized protein.	0.696
METTL7B	MYBPH	ENSOCUP00000024252	ENSOCUP00000009479	Methyltransferase like 7B.	Myosin binding protein H.	0.599
MYBPH	ACOXL	ENSOCUP00000009479	ENSOCUP00000026476	Myosin binding protein H.	Acyl-CoA oxidase like.	0.648
MYBPH	AMT	ENSOCUP00000009479	ENSOCUP00000047502	Myosin binding protein H.	Aminomethyltransferase.	0.629
MYBPH	FAM178B	ENSOCUP00000009479	ENSOCUP00000045252	Myosin binding protein H.	Uncharacterized protein.	0.761
MYBPH	G1U9S3_RABIT	ENSOCUP00000009479	ENSOCUP00000014521	Myosin binding protein H.	Uncharacterized protein.	0.686
MYBPH	GLDC	ENSOCUP00000009479	ENSOCUP00000003560	Myosin binding protein H.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.635