STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMTM5CKLF like MARVEL transmembrane domain containing 5. (156 aa)    
Predicted Functional Partners:
CMTM6
MARVEL domain-containing protein.
      
 0.867
CMTM7
CKLF like MARVEL transmembrane domain containing 7.
      
 0.865
CMTM8
CKLF like MARVEL transmembrane domain containing 8.
      
 0.853
CKLF
Chemokine like factor.
      
 0.845
CMTM1
MARVEL domain-containing protein.
      
 0.820
FAM180A
Family with sequence similarity 180 member A.
      
 0.678
SLC39A2
Solute carrier family 39 member 2.
      
 0.618
TREML1
Ig-like domain-containing protein.
  
  
 0.572
DUSP27
Dual specificity phosphatase 27, atypical; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
      
 0.549
GJC3
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
   
  
 0.495
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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