STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPPC3Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (180 aa)    
Predicted Functional Partners:
TRAPPC6B
Trafficking protein particle complex 6B.
   
 0.997
TRAPPC1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.996
TRAPPC4
Uncharacterized protein.
   
 0.995
TRAPPC8
Trafficking protein particle complex 8.
    
 0.993
TRAPPC10
Uncharacterized protein.
    
 0.989
TRAPPC6A
Uncharacterized protein.
   
 0.986
TRAPPC5
Trafficking protein particle complex 5.
   
 0.985
TRAPPC11
Trafficking protein particle complex 11.
    
 0.980
TRAPPC9
Trafficking protein particle complex 9.
    
 0.964
RAB1A
RAB1A, member RAS oncogene family.
   
 0.962
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.