STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTBK2Tau tubulin kinase 2. (1242 aa)    
Predicted Functional Partners:
CEP164
Centrosomal protein 164.
    
 0.915
LTV1
LTV1 ribosome biogenesis factor.
    
 0.813
SCLT1
Sodium channel and clathrin linker 1.
   
 0.774
FAM83C
FAM83 domain-containing protein.
    
 
 0.765
CEP83
Centrosomal protein 83.
    
 
 0.731
CEP89
Centrosomal protein 89.
   
 
 0.725
RIOK2
RIO kinase 2.
   
 0.718
CPLANE2
Ciliogenesis and planar polarity effector 2.
   
 0.669
CEP290
Centrosomal protein 290.
    
 0.667
TSR1
TSR1 ribosome maturation factor.
    
 0.659
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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