ARHGAP26 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ARHGAP26

Rho GTPase activating protein 26. (814 aa)

Predicted Functional Partners:

DNER

0.802

ZIC4

0.768

AMPH

0.722

CLDN18

0.671

ITPR1

0.670

LRRTM3

0.646

CDR2L

0.634

SH3YL1

0.633

IGLON5

0.628

RHOA

0.604

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMPH	ARHGAP26	ENSOCUP00000001938	ENSOCUP00000010033	Amphiphysin.	Rho GTPase activating protein 26.	0.722
AMPH	DNER	ENSOCUP00000001938	ENSOCUP00000014369	Amphiphysin.	Delta/notch like EGF repeat containing.	0.803
AMPH	IGLON5	ENSOCUP00000001938	ENSOCUP00000040591	Amphiphysin.	IgLON family member 5.	0.633
AMPH	ZIC4	ENSOCUP00000001938	ENSOCUP00000009427	Amphiphysin.	Zic family member 4.	0.785
ARHGAP26	AMPH	ENSOCUP00000010033	ENSOCUP00000001938	Rho GTPase activating protein 26.	Amphiphysin.	0.722
ARHGAP26	CDR2L	ENSOCUP00000010033	ENSOCUP00000000691	Rho GTPase activating protein 26.	Cerebellar degeneration related protein 2 like.	0.634
ARHGAP26	CLDN18	ENSOCUP00000010033	ENSOCUP00000031725	Rho GTPase activating protein 26.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.671
ARHGAP26	DNER	ENSOCUP00000010033	ENSOCUP00000014369	Rho GTPase activating protein 26.	Delta/notch like EGF repeat containing.	0.802
ARHGAP26	IGLON5	ENSOCUP00000010033	ENSOCUP00000040591	Rho GTPase activating protein 26.	IgLON family member 5.	0.628
ARHGAP26	ITPR1	ENSOCUP00000010033	ENSOCUP00000030534	Rho GTPase activating protein 26.	Inositol 1,4,5-trisphosphate receptor type 1.	0.670
ARHGAP26	LRRTM3	ENSOCUP00000010033	ENSOCUP00000003478	Rho GTPase activating protein 26.	Leucine rich repeat transmembrane neuronal 3.	0.646
ARHGAP26	RHOA	ENSOCUP00000010033	ENSOCUP00000011466	Rho GTPase activating protein 26.	Ras homolog family member A.	0.604
ARHGAP26	SH3YL1	ENSOCUP00000010033	ENSOCUP00000012636	Rho GTPase activating protein 26.	SH3 domain-containing protein.	0.633
ARHGAP26	ZIC4	ENSOCUP00000010033	ENSOCUP00000009427	Rho GTPase activating protein 26.	Zic family member 4.	0.768
CDR2L	ARHGAP26	ENSOCUP00000000691	ENSOCUP00000010033	Cerebellar degeneration related protein 2 like.	Rho GTPase activating protein 26.	0.634
CDR2L	DNER	ENSOCUP00000000691	ENSOCUP00000014369	Cerebellar degeneration related protein 2 like.	Delta/notch like EGF repeat containing.	0.481
CDR2L	ZIC4	ENSOCUP00000000691	ENSOCUP00000009427	Cerebellar degeneration related protein 2 like.	Zic family member 4.	0.490
CLDN18	ARHGAP26	ENSOCUP00000031725	ENSOCUP00000010033	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Rho GTPase activating protein 26.	0.671
DNER	AMPH	ENSOCUP00000014369	ENSOCUP00000001938	Delta/notch like EGF repeat containing.	Amphiphysin.	0.803
DNER	ARHGAP26	ENSOCUP00000014369	ENSOCUP00000010033	Delta/notch like EGF repeat containing.	Rho GTPase activating protein 26.	0.802