BIVM protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BIVM

Uncharacterized protein. (1633 aa)

Predicted Functional Partners:

ERCC6

0.998

WRN

0.996

ERCC3

0.995

XPA

0.994

ERCC2

0.991

ERCC4

0.984

ERCC1

0.964

ENSOCUP00000033462

0.940

FANCM

0.938

LOC100338745

0.930

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BIVM	ENSOCUP00000033462	ENSOCUP00000010688	ENSOCUP00000033462	Uncharacterized protein.	Uncharacterized protein.	0.940
BIVM	ERCC1	ENSOCUP00000010688	ENSOCUP00000024644	Uncharacterized protein.	Uncharacterized protein.	0.964
BIVM	ERCC2	ENSOCUP00000010688	ENSOCUP00000028988	Uncharacterized protein.	ERCC excision repair 2, TFIIH core complex helicase subunit.	0.991
BIVM	ERCC3	ENSOCUP00000010688	ENSOCUP00000001942	Uncharacterized protein.	ERCC excision repair 3, TFIIH core complex helicase subunit.	0.995
BIVM	ERCC4	ENSOCUP00000010688	ENSOCUP00000012874	Uncharacterized protein.	ERCC excision repair 4, endonuclease catalytic subunit.	0.984
BIVM	ERCC6	ENSOCUP00000010688	ENSOCUP00000038361	Uncharacterized protein.	ERCC excision repair 6, chromatin remodeling factor.	0.998
BIVM	FANCM	ENSOCUP00000010688	ENSOCUP00000006526	Uncharacterized protein.	FA complementation group M.	0.938
BIVM	LOC100338745	ENSOCUP00000010688	ENSOCUP00000013446	Uncharacterized protein.	VWFA domain-containing protein.	0.930
BIVM	WRN	ENSOCUP00000010688	ENSOCUP00000010872	Uncharacterized protein.	WRN RecQ like helicase.	0.996
BIVM	XPA	ENSOCUP00000010688	ENSOCUP00000011935	Uncharacterized protein.	XPA, DNA damage recognition and repair factor.	0.994
ENSOCUP00000033462	BIVM	ENSOCUP00000033462	ENSOCUP00000010688	Uncharacterized protein.	Uncharacterized protein.	0.940
ENSOCUP00000033462	ERCC1	ENSOCUP00000033462	ENSOCUP00000024644	Uncharacterized protein.	Uncharacterized protein.	0.931
ENSOCUP00000033462	ERCC2	ENSOCUP00000033462	ENSOCUP00000028988	Uncharacterized protein.	ERCC excision repair 2, TFIIH core complex helicase subunit.	0.573
ENSOCUP00000033462	ERCC3	ENSOCUP00000033462	ENSOCUP00000001942	Uncharacterized protein.	ERCC excision repair 3, TFIIH core complex helicase subunit.	0.710
ENSOCUP00000033462	ERCC4	ENSOCUP00000033462	ENSOCUP00000012874	Uncharacterized protein.	ERCC excision repair 4, endonuclease catalytic subunit.	0.948
ENSOCUP00000033462	ERCC6	ENSOCUP00000033462	ENSOCUP00000038361	Uncharacterized protein.	ERCC excision repair 6, chromatin remodeling factor.	0.503
ENSOCUP00000033462	FANCM	ENSOCUP00000033462	ENSOCUP00000006526	Uncharacterized protein.	FA complementation group M.	0.999
ENSOCUP00000033462	LOC100338745	ENSOCUP00000033462	ENSOCUP00000013446	Uncharacterized protein.	VWFA domain-containing protein.	0.556
ENSOCUP00000033462	WRN	ENSOCUP00000033462	ENSOCUP00000010872	Uncharacterized protein.	WRN RecQ like helicase.	0.995
ENSOCUP00000033462	XPA	ENSOCUP00000033462	ENSOCUP00000011935	Uncharacterized protein.	XPA, DNA damage recognition and repair factor.	0.904