STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP100Uncharacterized protein. (195 aa)    
Predicted Functional Partners:
PROSER3
Proline and serine rich 3.
   
    0.601
ENSOCUP00000039423
DUF4724 domain-containing protein.
   
    0.601
CCDC39
Coiled-coil domain containing 39.
   
  
 0.579
LMO3
LIM domain only 3.
      
 0.530
TAF7L
TAFII55_N domain-containing protein.
      
 0.527
CYTL1
Uncharacterized protein.
   
  
 0.525
MARCHF10
Membrane associated ring-CH-type finger 10.
   
  
 0.501
PODXL2
Podocalyxin like 2.
   
  
 0.496
PLSCR4
Phospholipid scramblase; May mediate accelerated ATP-independent bidirectional transbilayer migration of phospholipids upon binding calcium ions that results in a loss of phospholipid asymmetry in the plasma membrane. Belongs to the phospholipid scramblase family.
      
 0.483
CCDC42
Coiled-coil domain containing 42.
  
  
 0.480
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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