Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCNA1 | CCNA2 | ENSOCUP00000013635 | ENSOCUP00000020057 | Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. | Cyclin A2; Belongs to the cyclin family. | 0.944 |
CCNA1 | CDT1 | ENSOCUP00000013635 | ENSOCUP00000015721 | Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. | Chromatin licensing and DNA replication factor 1. | 0.943 |
CCNA1 | USP37 | ENSOCUP00000013635 | ENSOCUP00000010778 | Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.547 |
CCNA2 | CCNA1 | ENSOCUP00000020057 | ENSOCUP00000013635 | Cyclin A2; Belongs to the cyclin family. | Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. | 0.944 |
CCNA2 | CDT1 | ENSOCUP00000020057 | ENSOCUP00000015721 | Cyclin A2; Belongs to the cyclin family. | Chromatin licensing and DNA replication factor 1. | 0.963 |
CCNA2 | USP37 | ENSOCUP00000020057 | ENSOCUP00000010778 | Cyclin A2; Belongs to the cyclin family. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.532 |
CDT1 | CCNA1 | ENSOCUP00000015721 | ENSOCUP00000013635 | Chromatin licensing and DNA replication factor 1. | Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. | 0.943 |
CDT1 | CCNA2 | ENSOCUP00000015721 | ENSOCUP00000020057 | Chromatin licensing and DNA replication factor 1. | Cyclin A2; Belongs to the cyclin family. | 0.963 |
CDT1 | TRAIP | ENSOCUP00000015721 | ENSOCUP00000007555 | Chromatin licensing and DNA replication factor 1. | TRAF interacting protein. | 0.405 |
CDT1 | USP37 | ENSOCUP00000015721 | ENSOCUP00000010778 | Chromatin licensing and DNA replication factor 1. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.557 |
OTUD6B | USP1 | ENSOCUP00000000191 | ENSOCUP00000011141 | OTU domain containing 6B. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.573 |
OTUD6B | USP28 | ENSOCUP00000000191 | ENSOCUP00000027870 | OTU domain containing 6B. | Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family. | 0.586 |
OTUD6B | USP37 | ENSOCUP00000000191 | ENSOCUP00000010778 | OTU domain containing 6B. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.520 |
OTUD6B | USP7 | ENSOCUP00000000191 | ENSOCUP00000026870 | OTU domain containing 6B. | Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family. | 0.620 |
STAM | STAM2 | ENSOCUP00000003268 | ENSOCUP00000000305 | Signal transducing adaptor molecule. | Signal transducing adaptor molecule 2. | 0.838 |
STAM | USP37 | ENSOCUP00000003268 | ENSOCUP00000010778 | Signal transducing adaptor molecule. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.566 |
STAM2 | STAM | ENSOCUP00000000305 | ENSOCUP00000003268 | Signal transducing adaptor molecule 2. | Signal transducing adaptor molecule. | 0.838 |
STAM2 | USP37 | ENSOCUP00000000305 | ENSOCUP00000010778 | Signal transducing adaptor molecule 2. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.566 |
TRAIP | CDT1 | ENSOCUP00000007555 | ENSOCUP00000015721 | TRAF interacting protein. | Chromatin licensing and DNA replication factor 1. | 0.405 |
TRAIP | USP37 | ENSOCUP00000007555 | ENSOCUP00000010778 | TRAF interacting protein. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.518 |
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