STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAP18Uncharacterized protein. (210 aa)    
Predicted Functional Partners:
RNPS1
RRM domain-containing protein.
   
 0.999
ACIN1
Apoptotic chromatin condensation inducer 1.
   
 0.996
PNN
Pinin, desmosome associated protein.
   
 0.992
SAP30
Sin3A associated protein 30.
   
 
 0.978
HDAC1
Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
   
 0.964
ARID4A
AT-rich interaction domain 4A.
   
 
 0.955
ARID4B
AT-rich interaction domain 4B.
   
 
 0.955
HDAC2
Histone deacetylase 2.
   
 0.955
SIN3A
SIN3 transcription regulator family member A.
    
 0.951
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
   
 
 0.913
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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